PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr10P30710_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 440aa    MW: 45222.5 Da    PI: 6.5151
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr10P30710_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH376e-12259304555
                             HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                     HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                             h+++Er RR+ri +++  L+el+P+a      K +Ka++L + ++Y+k Lq
  GSMUA_Achr10P30710_001 259 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 304
                             99***********************8.....6******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.23E-17252314IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.02E-13252308No hitNo description
PROSITE profilePS5088817.39254303IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-16256313IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.9E-9259304IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-13260309IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MQHGSREVRG GMAASASAQM ALHDDHGSQQ IQNPGLHDDF FDQMLSGLPS AWPDLGNPKS  60
PWDASAAQKL FRIDLAGKQP DESQPEAAAE GLRYASYEEA TMLASRLSQS QGSGGSSPTG  120
EAMMLQLNNH HILPAVGRSQ TAVGGSVGES GLLPLPLTLG SGGAADPRII VETPRDEMDR  180
PYKSPDHNGG EELYNGLGGS IRAAQAATGQ HFHHPQSYGG AAAPAGVGQG PAASASSGGG  240
TPPQKQKVRA RRGQATDPHS IAERLRRERI AERMKALQEL VPNANKTDKA SMLDEIIDYV  300
KFLQLQVKVL SMSRLGGAAA VAPLVADIST EGPGGRAGAN GAAAGNNDSL TVTEHRVAKM  360
MEEDMGSAMQ YLQGKGLCLM PISLASAISS AACRPSAGGL VPAPPPATTS AAAAAESPSS  420
PSASALTVQS AAADTTAPKR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1263268RLRRER
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009381570.10.0PREDICTED: transcription factor bHLH82-like isoform X2
SwissprotQ9ZUG97e-79BH066_ARATH; Transcription factor bHLH66
TrEMBLM0RMU50.0M0RMU5_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr10P30710_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP141937118
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.12e-46LJRHL1-like 1